Price per person across the 21 options priced per person: € 20–€ 245 (median € 32). With 100+ reviews: 19 of 48.
Of the 48 options: 37 with live guides in English, 46 with free cancellation, 41 with instant confirmation, 10 with hotel pickup, 20 kid-friendly, 29 private and 34 bookable last-minute.
How we rank: quality, number of reviews, availability, booking conditions and relevance to the topic. In the comparison table, our top 3 comes first. Prices are per person, except options priced per group: that price is for the whole group, and the per-person figure assumes the group is full. “Top rated” = the highest score among options with at least 100 reviews.
Boat Tours in Malta
Based on each operator's calendar. Confirmed when you book.
48 options
The 15 best
Ranked by quality, reviews, availability and booking conditions.
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Our pick ·-9% off its previous price
Malta: Blue Lagoon & Gozo Cruise with Waterslide & 3-Hour Island TimeFull-day cruise from St. Paul's Bay to Blue Lagoon and Gozo with swimming, waterslide, and 3 hours free time. Family-run boat since 1984, returns at 5pm.Every day · 10:00 · All ages★ 4.61 (2,170 reviews)Duration: 7hLive guide: EN✓ Free cancellation.from € 32 per personView
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Excellent quality
Gozo & Comino: Blue Lagoon, Citadel & Santa Marija Day TripFeel the salt air on a full day trip to Gozo & Comino from Bugibba, with stops at the ancient Citadel, Santa Marija Tower, and time to swim in the Blue Lagoon. Includes onboard WiFi.Every day · 10:00 and 10:40 · Up to age 80★ 4.74 (1,839 reviews)Duration: 7h 30m✓ Free cancellation.from € 45 per personView
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Travelers' pick
Malta: Private Boat Tour Blue Lagoon, Comino & Crystal LagoonSwim in Malta’s Blue Lagoon, explore Comino caves, and snorkel Crystal Lagoon on a private boat tour with flexible stops and local captain. Includes equipment.Every day · 14 start times, 07:00 to 17:00 · Pickup available★ 4.95 (1,309 reviews)Duration: 2hLive guide: EN · IT✓ Free cancellation.from € 169 per groupView
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Travelers' pick
Malta: Blue Lagoon & Comino Caves Cruise with Swim & SlideFeel the splash at Malta’s Blue Lagoon, cruise Comino’s caves, and relax on deck chairs. Includes slide access, shaded seating, and onboard bar.Every day · 10:00 · All ages★ 4.70 (841 reviews)Duration: 7hLive guide: EN✓ Free cancellation.from € 30 per personView
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Travelers' pick
Private boat tour Malta: Anchor in Blue Lagoon alonePrivate boat tour in Malta with skipper exploring Blue Lagoon, Crystal Lagoon and Comino caves. Snorkel gear included. Anchor in open water.Every day · 9 start times, 08:30 to 16:30 · Hotel pickup★ 4.90 (397 reviews)Duration: 3hLive guide: EN✓ Free cancellation.from € 279 per groupView
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Travelers' pick
Comino, Gozo & Blue Lagoon Cruise: Caves, Swim & Local CrewFeel the sea breeze on a half-day cruise from Malta to Comino, Gozo, and the Blue & Crystal Lagoons. Swim, snorkel, and explore caves with a local crew, includes welcome drink.Every day · 10:15 and 13:15 · All ages★ 4.60 (184 reviews)Duration: 3h–4h✓ Free cancellation.from € 25 per personView
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Best value
Valletta Harbour Cruise from Sliema: 90 minutes, no crowdsCruise past Valletta, Grand Harbour and the Three Cities on this 90-minute harbour tour from Sliema, complete with audio commentary to guide your journey.Every day · 10:30, 12:30, 14:30 and 16:00 · All ages★ 4.68 (182 reviews)Duration: 1h 15m–1h 30m✓ Free cancellation.from € 20 per personView
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Malta Private Sailing Charter: Blue Lagoon, Comino & BBQ LunchStep aboard in Valletta’s Grand Harbour for a private day sailing to Comino’s Blue Lagoon, snorkelling stops, and fresh BBQ lunch: includes skipper & gear.Every day · 09:30★ 4.99 (679 reviews)Duration: 8h 30mLive guide: ENfrom € 595 per groupView
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Travelers' pick
Malta: Catamaran Cruise, Comino Caves & Lunch with DrinksFeel the calm of Malta’s coast on a catamaran cruise with swimming stops, fresh lunch, and drinks included. Family-run, not crowded, with Comino caves sights.Fri · 10:15 · Season until 11 Dec · All ages★ 4.98 (692 reviews)Duration: 6h 20m✓ Instant confirmation.from € 129 per personView
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Travelers' pick
Valletta Harbour Cruise: Grand & Marsamxett Harbours with Fort HistoryCruise Malta's two largest natural harbours with views of Valletta's forts, the 3 Cities, and sites from the 1565 and 1942 sieges. English commentary included. Departs Sliema.Every day · 10:30, 12:30, 14:30 and 16:00 · All ages★ 4.61 (170 reviews)Duration: 1h 15m✓ Free cancellation.from € 20 per personView
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Malta Half-Day Sailing Charter & Bay ExplorationHalf-day sailing charter in Malta with skipper, snorkeling gear and paddle boards. Choose from 4 bays: Hoffriet, Fra Ben, St Pauls Islands or Balluta. 4 hours.Next departure: 1 Apr 2027 · Pickup available★ 4.99 (617 reviews)Duration: 4h✓ Free cancellation.from € 450 per groupView
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Travelers' pick ·-10% off its previous price
Comino: Blue Lagoon & Crystal Lagoon Boat Cruise with SnorkelingFull-day boat cruise from Mellieha to Comino's Blue Lagoon and Crystal Lagoon with snorkeling and Santa Maria Caves. Includes guide, snorkel gear, and restroom. 5–6 hours.Every day · 10:00 and 13:00 · All ages★ 4.81 (151 reviews)Duration: 4hLive guide: EN✓ Free cancellation.from € 23 per personView
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Travelers' pick ·-10% off its previous price
Mellieha: Gozo, Comino & Blue Lagoon Cruise with CavesFeel the rush of Malta’s sea caves, swim in the Blue Lagoon, and cruise past Gozo from Mellieha. Includes snorkeling gear, local guide, and flexible stops.Every day · 10:00 and 13:00 · All ages★ 4.68 (243 reviews)Duration: 4hLive guide: EN✓ Free cancellation.from € 27 per personView
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Travelers' pick
Malta: Private Blue Lagoon, Gozo & Comino Boat CharterSwim in Malta’s Blue Lagoon, explore Gozo by private boat, and snorkel hidden bays. Includes pickup from Cirkewwa or Mgarr port and all permits.Every day · 12 start times, 07:30 to 17:00★ 4.92 (202 reviews)Duration: 2h–4hLive guide: EN✓ Free cancellation.from € 139 per groupView
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★ Top rated
Malta: Private Boat Tour Blue Lagoon, Comino & Gozo CavesSwim, snorkel & relax on a private Malta boat tour to Blue Lagoon, Comino sea caves & Gozo’s coves. Includes skipper, snorkel gear, ice box & flexible stops.Every day · 9 start times, 07:30 to 17:00 · Pickup available★ 4.96 (188 reviews)Duration: 3hLive guide: EN✓ Free cancellation.from € 167 per groupView
Also popular with travelers
The ones most travelers have taken, by number of reviews.
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Travelers' pick
Malta: Private Boat Tour Comino Blue Lagoon & GozoSwim in the Blue Lagoon, explore Comino’s caves, and relax on Gozo’s quiet bays on a private Malta boat trip with snacks, snorkel gear, and flexible pickup.Every day · Every 1 h, 09:00 to 17:00 · Pickup available★ 4.95 (155 reviews)Duration: 4hLive guide: EN · IT✓ Free cancellation.from € 260 per groupView
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Travelers' pick
Gozo & Comino: Blue Lagoon Caves Small Group Boat TourFeel the sea breeze on a small group cruise from Malta to Gozo & Comino, swim at Blue Lagoon, explore sea caves up close, and relax with flexible stops.Every day · 10:00 and 13:00 · Season until 15 Dec · Up to age 70★ 4.66 (141 reviews)Duration: 3hLive guide: EN✓ Free cancellation.from € 23 per personView
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Excellent quality
Private Boat Tour Comino: Anchor in the bluest watersPrivate boat charter to Comino and Blue Lagoon with English-speaking skipper. Swim, snorkel, explore sea caves with gear included.Every day · 6 start times, 08:30 to 16:30 · Pickup available★ 4.85 (131 reviews)Duration: 3hLive guide: EN · IT✓ Free cancellation.from € 289 per groupView
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Comino speedboat tour from St. Julian's: Enter the cavesSpeedboat tour to Comino from St. Julian's with two swimming stops at Blue Lagoon and Santa Marija Bay, plus a full cave circuit. You go inside the caves, not past them.Every day · 09:00 and 10:00 · Season until 30 Nov★ 4.89 (88 reviews)Duration: 7hLive guide: EN✓ Free cancellation.from € 59 per personView
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Excellent quality
Malta: Private Yacht Charter Day Trip & Custom RouteFeel the wind off Malta’s coast on a private sailing charter. Swim in Comino’s lagoons, relax with friends, and let your skipper handle everything: includes drinks & snorkel gear.Every day · 08:00, 09:00 and 10:00★ 4.97 (73 reviews)Duration: 8hLive guide: EN · IT✓ Free cancellation.from € 680 per groupView
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Travelers' pick
Private Boat Trip: Blue Lagoon, Comino & MaltaPrivate boat tour of Malta's Blue Lagoon and Comino with snorkeling, swimming and cave exploration. Just you, the captain and the Mediterranean for 3–4 hours.Every day · 6 start times, 09:00 to 18:00★ 4.89 (72 reviews)Duration: 3h–4hLive guide: EN · IT✓ Free cancellation.from € 220 per groupView
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Travelers' pick
Malta: Half-Day Catamaran & Blue Lagoon Swim with WineHalf-day catamaran from Malta to Blue Lagoon, Santa Maria Caves & Crystal Lagoon. Small group (20 max), snorkeling gear, wine & beer included. 4 hours total.Every day · 09:00 and 14:00 · All ages★ 4.89 (71 reviews)Duration: 4hLive guide: EN✓ Free cancellation.from € 65 per personView
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Excellent quality
Comino & Blue Lagoon: Private Boat Tour with Snorkeling MaltaPrivate boat tour from Malta to Comino's Blue Lagoon, St. Nicholas Beach & Santa Marija Caves with snorkeling gear included. Flexible start times and sunset option.Every day · No fixed time · Pickup available · All ages★ 4.58 (66 reviews)Duration: 4h–7hLive guide: EN · DE · FI · ZH +15✓ Free cancellation.from € 245 per personView
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ATV riding Gozo from Malta: Private boat & Jeep tourSpend eight to nine hours exploring Gozo's countryside, villages and coastal views by Jeep with private boat transfers, a driver-guide and three-course lunch.Every day · 08:30 · Hotel pickup★ 4.16 (63 reviews)Duration: 8h–9hLive guide: EN · DE · IT · FR✓ Free cancellation.from € 100 per personView
Compare 24 more options for Boat Tours in Malta
From € 20 per person · 1 h to 8 h
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Travelers' pick
Malta Sunset Boat Tour: Bugibba to Blue Lagoon CruiseSunset boat cruise from Bugibba to Comino's Blue Lagoon with 2-hour stop, food & drinks onboard, water slide. Evening return under stars.Next departure: 5 May 2027 · All ages★ 4.82 (133 reviews)Duration: 4h✓ Free cancellation.from € 30 per personView
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Excellent quality
Private Boat Charter to Comino Blue Lagoon from MaltaMeet at Malta's marina at 9am, sail to Comino's Blue Lagoon with a skipper who navigates and shares Malta's history, swim in the lagoon.Every day · 09:00★ 4.66 (47 reviews)Duration: 8hLive guide: EN · IT · FR✓ Free cancellation.from € 688 per groupView
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Private Yacht Tour Malta: 8 Hours Sailing & SnorkelingEight-hour private yacht charter from Marsamxett Harbour with skipper, snorkeling gear and paddleboards included. Sail past St. Paul's Islands.Every day · 09:30★ 5.00 (52 reviews)Duration: 8hLive guide: EN · IT✓ Free cancellation.from € 790 per groupView
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Travelers' pick
Comino Blue Lagoon Catamaran: All-Inclusive & Open BarFull-day catamaran from Malta to Comino's Blue Lagoon with buffet lunch, wine & beer open bar, swimming stops, and music. Weather-dependent routing, around 6 hours.Next departure: 23 Apr 2027 · Ages 17–90★ 4.31 (39 reviews)Duration: 7hLive guide: EN · IT✓ Free cancellation.from € 89 per personView
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Excellent quality
Private Boat Tour: Comino Blue Lagoon & Crystal Lagoon from MaltaPrivate boat tour from Malta to Comino's Blue Lagoon and Crystal Lagoon with snorkel gear, shade canopy and swim stops in turquoise water away from the crowds.Every day · 6 start times, 05:30 to 16:30★ 5.00 (36 reviews)Duration: 1hLive guide: EN✓ Free cancellation.from € 89 per groupView
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Excellent quality
Private boat trip Comino: Blue Lagoon, caves and snorkelingPrivate boat charter around Comino with skipper guide and snorkeling gear. Swim and snorkel in the Mediterranean at Blue Lagoon, Crystal Lagoon and Santa Maria Caves.Every day · Every 1 h, 09:00 to 18:00★ 5.00 (33 reviews)Duration: 3hLive guide: EN✓ Free cancellation.from € 210 per groupView
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Travelers' pick
Private Boat Charter: Blue Lagoon, Crystal Lagoon & CominoPrivate boat charter around Comino with skipper and fuel included. Swim and snorkel at the Blue Lagoon and Crystal Lagoon.Every day except Tuesday · 09:00 and 13:30 · Season until 30 Nov★ 4.92 (53 reviews)Duration: 4hLive guide: EN✓ Free cancellation.from € 320 per groupView
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Excellent quality
Snorkeling Malta: Blue Lagoon, Comino & GozoPrivate boat snorkeling in Malta visits Crystal Lagoon and Blue Lagoon with swimming, cave exploration and equipment included. Small or larger groups available.Every day · 7 start times, 07:00 to 14:30★ 4.89 (19 reviews)Duration: 7hLive guide: EN · IT✓ Free cancellation.from € 369 per groupView
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Excellent quality
Private speed boat to Comino, Blue Lagoon and cavesPrivate 2-hour speed boat tour from Malta to Comino with entry to Blue Lagoon and Crystal Lagoon, swimming and snorkeling in caves including Popeye's Cave and Lovers Cave.Every day · 09:00, 10:00, 12:00, 13:00 and 15:00★ 4.82 (28 reviews)Duration: 2hLive guide: EN✓ Free cancellation.from € 159 per groupView
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Excellent quality
Private speedboat tour: Comino, Blue Lagoon & cavesPrivate speedboat charter around Comino with your skipper as guide, stopping at Blue Lagoon, Crystal Lagoon and Santa Maria Bay to swim.Every day · 09:00, 10:00, 12:00, 13:00 and 14:00★ 4.92 (26 reviews)Duration: 3hLive guide: EN✓ Free cancellation.from € 269 per groupView
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Private Boat Tour Malta: Blue Lagoon, Gozo & CominoPrivate boat tour of Malta's Gozo and Comino islands with snorkeling in San Blas and Dahlet Qorrot bays, Blue Lagoon, Crystal Lagoon and sea caves.Every day · 6 start times, 08:30 to 14:30★ 5.00 (15 reviews)Duration: 6hLive guide: EN✓ Free cancellation.from € 579 per groupView
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Travelers' pick
Valletta Harbour Cruise from Sliema: Grand Harbour & Three CitiesCruise from Sliema through Marsamxett and Grand Harbour past Valletta's fortifications, the Three Cities, and Fort St.Every day · 10:30, 12:30 and 14:45 · All ages★ 3.75 (12 reviews)Duration: 1h 30m✓ Free cancellation.from € 20 per personView
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Private Family Boat Trip: Blue Lagoon, Comino & GozoPrivate boat charter for families in Malta with snorkeling gear, shaded deck and kid-friendly safety features. Anchor at Blue Lagoon and Crystal Lagoon at your own pace.Every day · 09:30 and 13:30★ 5.00 (12 reviews)Duration: 4hLive guide: EN✓ Free cancellation.from € 369 per groupView
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Malta Boat Charter: Blue Lagoon, Crystal Lagoon, Gozo TourCharter a private boat in Malta for eight hours with skipper and snorkeling gear included. Sail from the mainland to Blue Lagoon and Crystal Lagoon.Every day · 09:00★ 5.00 (9 reviews)Duration: 8h✓ Free cancellation.from € 700 per groupView
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Excellent quality
Snorkeling Comino: Private Boat Charter with Blue LagoonPrivate 2-hour boat charter around Comino with snorkeling gear, departing from Malta or Gozo, stopping at the Blue Lagoon and hidden sea caves.Every day · Every 1 h, 08:00 to 18:00★ 5.00 (15 reviews)Duration: 2h✓ Free cancellation.from € 180 per groupView
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Private Boat Tour Malta: Blue Lagoon, Comino & Sea CavesPrivate boat tour around Comino with skipper and guide, swimming and snorkeling in the Blue Lagoon and Crystal Lagoon.Every day · 11 start times, 07:00 to 17:00★ 5.00 (9 reviews)Duration: 2h–4hLive guide: EN✓ Free cancellation.from € 169 per groupView
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Snorkeling in Malta: Blue Lagoon, Comino & GozoSnorkel the Blue Lagoon, Crystal Lagoon and Santa Maria Bay from Malta or Gozo, with guide, boat and equipment included.Next departure: 1 Jul 2027 · All ages★ 5.00 (13 reviews)Duration: 3h–7hLive guide: EN✓ Free cancellation.from € 245 per personView
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Comino private boat charter: Blue Lagoon & caves, 3 hoursPrivate 3-hour boat charter from Malta to Comino with swimming in the Blue Lagoon and Crystal Lagoon, snorkeling gear and water included, customized by your captain.Every day · Every 1 h, 08:00 to 16:00★ 5.00 (11 reviews)Duration: 3h✓ Free cancellation.from € 260 per groupView
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ATV Riding in Gozo: Self-Drive Quad Bikes with Comino CruiseSelf-drive 570cc quad bikes across Gozo's coastal and countryside trails, visiting Ta' Ċenċ Cliffs, Dwejra Bay, and Għasri Valley.Every day · 10:00 · Hotel pickup · From age 5★ 4.60 (5 reviews)Duration: 7h–8hLive guide: EN✓ Free cancellation.from € 98 per personView
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Snorkeling in Malta: Blue Lagoon, Comino & GozoBoat tour from Malta to Comino, Blue Lagoon and three nearby beaches with snorkeling gear, guide and light snack included.Wed and Sat · 09:00 · Pickup available · All ages★ 4.00 (6 reviews)Duration: 4hLive guide: EN · DE · IT · FR✓ Free cancellation.from € 50 per personView
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Sunset Sailing Malta: Romantic Evening on the MowgliSail the Mowgli, a 14-metre yacht, through Malta's bays and Gran Harbour at sunset with dinner on board, anchoring at Manoel Island or Rinella Bay to watch the stars.Next departure: 1 May 2027★ 5.00 (5 reviews)Duration: 4hLive guide: EN · RU · IT✓ Free cancellation.from € 550 per groupView
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Private Yacht Charter Malta, Gozo, Comino: Half-DayBoard a 41ft cabin cruiser to Comino's Smugglers Cave, Blue Lagoon and Crystal Lagoon. Swim and snorkel in turquoise waters with paddleboard and snorkeling gear.Every day · 09:00★ 5.00 (4 reviews)Duration: 4hLive guide: EN✓ Free cancellation.from € 880 per groupView
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Private Speed Boat Charter: Comino & Blue LagoonPrivate speed boat charter for up to seven guests around Comino and the Blue Lagoon, with a professional skipper, swim and snorkel stops, and shaded deck space.Every day · 10:00 and 13:15★ 5.00 (2 reviews)Duration: 3hLive guide: EN✓ Free cancellation.from € 249 per groupView
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Malta: Grand Harbour Cruise with Valletta & Three Cities Views90-minute harbour cruise from Sliema around Valletta, Grand Harbour and Marsamxett Harbour with live commentary. Hop-off at Esplora science centre. Air-conditioned catamaran.Every day · 10:30, 12:30 and 14:45 · All ages★ 3.74 (23 reviews)Duration: 1h 30mLive guide: EN · DE✓ Free cancellation.from € 20 per personView